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cap DLP data at the lengths of chromosomes

Source: R/converting_segments_and_reads.R
cap_dlp_to_chrom_lengths.Rd

DLP can output bins/segments longer than the actual chromosomes as it chops to 500kb bins. This function sets the end column to be no longer than the chromosome it occurs on.

Usage

cap_dlp_to_chrom_lengths(
  rs_df,
  chrom_col = "chr",
  genome_version = c("hg19", "hg38")
)

Arguments

rs_df

tibble/dataframe. Reads or segments dataframe

chrom_col

string. Name of chromosome column

genome_version

string. Name of genome version to use. Default: hg19

Value

input dataframe with final bins/segments not exceeding total chromosome lengths