convert long format reads to wide format

A common manipulation with reads files for various analyses is to reshape long format reads data (each row is a 500kb bin with state values for each cell) to wide format, with chr_start_end rows and cell_id columns.

Usage

convert_long_reads_to_wide(reads_df, state_col = "state")

Arguments

reads_df

is the reads table to convert.

Value

wide format table

Details

minimal required columns for input are: chr,start,end,cell_id,state