add centromere information to reads by chromosome

See dlptools::read_and_prep_ucsg_cenrtomeres() for details of file origins.

Usage

add_centromere_locations(
  reads_df,
  centro_file = NULL,
  version = c("hg19", "hg38")
)

Arguments

centro_file

NULL or string to the path if you download yourself

hg19

boolean to target hg19 for loading

hg38

boolean to target hg38 for loading

Value

input table with centromere information added by chromosome