get a row number of where to place each clone label.

A single clone can appear on multiple clades of the tree or in one monophyletic group. On the heatmap, we need to determine were to put a clone ID label (e.g., A, B, C, etc), as we don't want a label for each cell id. Typically, we label the largest clade with the clone ID, and then provide a legend mapping clone colors to IDs. This function will find the "middle" cell ID of the clade being labelled as the position to place the clone ID.

Usage

get_clone_id_label_positions(clones, only_largest_clone_group = TRUE)

Arguments

clones

table of cell_id, clone_id

only_largest_clone_group

boolean. TRUE means only largest clone clade will receive the clone ID label. FALSE means all clades wil get the clone label.

Value

tibble of clone_id, and a row_number to place it, which ComplexHeatmap understands as the position to place the label on the left side annotation.