Cytoband files originally obtained from UCSC golden path genomes and parsed
to collect the total centromere spans.
Usage
load_ucsg_cenrtomeres(version = c("hg19", "hg38"), centro_file = NULL)
Arguments
- centro_file
NULL or string to the path if you download yourself
- hg19
boolean to target hg19 for loading
- hg38
boolean to target hg38 for loading
Value
tibble of parsed centromere spans
Details
hg19:
https://hgdownload.soe.ucsc.edu/goldenPath/hg19/database/cytoBand.txt.gz
hg38:
https://hgdownload.soe.ucsc.edu/goldenPath/hg38/database/cytoBand.txt.gz
TODO: can I stash the file if it's already loaded once?