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generate a plot of just the background states, making the foreground white.

Source: R/foreground_plots.R
plot_bg_state_highlight.Rd

These are the actual state values of the bins in background bins.

Usage

plot_bg_state_highlight(states_df, phylogeny, file_name)

Arguments

states_df

bin based dataframe that has foreground events marked.

phylogeny

phylo object used to infer foreground

file_name

name for the resulting png.